wow Brian, I haven't seen this diary for a while but love how its turning out, that blue on the cap and body/neck looks fantastic and cool headstock shape. Wiring/shielding looks neat too,I think this is your first build so you must be stoked and hanging to plug it in.
Don't stress about glueing the neck, as others have said put both E strings on to check string height on fingerboard and use plenty of glue, can always wipe the excess off after its clamped.
Can't wait to see this strung up and a sound demo !