What platform are you running your recording software on?, PC or Mac?, if you're running your software on a PC there's a way you can use your pedals to record with without doing any re-amping, here's what you do:
Download and install a plugin called NadIR (it's an Impulse Response speaker cab simulator), next download some impulse response files from the internet and copy them into a folder which you create in the folder for your NadIR installation, next fire up your DAW and set up an audio track for recording, next load up an instance of the NadIR plugin for the track and then load up an impulse response in NadIR, you can then connect your pedals directly to the Line In on your Audio Interface, your guitar will sound like it's being played through an amp.