After trying a trial alignment using Dingo Bass' high & low string alignment method (as Brendan suggested), I found I couldn't get enough tension in the strings to overcome the natural stiffness and pre-rolled curves in them, not to mention the pickup magnets, to accurately position the bridge... It did show me that the strings were evenly positioned from the edges of the fingerboard along it's length though so it was not a wasted effort.
So tonight I had another go, but this time substituted some regular string (cotton cooking twine in this case) for the steel strings and had much better luck. The string is thin and springy so allowed for enough stretch to prevent sagging but still make the repositioning pretty painless without having to readjust clamps on the strings. After some checks with a short and a long steel rule I was happy that my bridge was parallel with the bridge pickup and in the right position - within a millimetre or two of Dingo Bass' measurement as it happened - so I marked the seven holes in pencil then pressing the points of the screws centrally as a more permanent mark ready for drilling on a drill press at work.
Then it's back to sanding...