So I spent most of last night hammering in threaded inserts for screws and tremolo posts and I decided to test fit the Gotoh locking trem I purchased off eBay a few months ago. Upon test fitting I discovered that the locking trem is crooked? See picture. (Ignore the pencil mark, it doesn't represent the center line)

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Is the locking trem actually crooked or is the routing of the cavity crooked? If the locking trem really is crooked, will this be a problem that is significant enough to affect tuning, intonation, string spacing, etc? I really don't know how to proceed. I'm going to investigate further and hopefully when I come back to the forum later today someone has offered a potential solution.